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Mattia Pelizzola

Researcher
Genomic Science
Research center
About

I am a computational biologist with background in biotechnology, interested in computational and experimental (epi)genomics. I lead a research group studying how co- and post- transcriptional events shape gene expression programs, through an interdisciplinary approach combining cutting edge experimental and computational methods (https://genomics.iit.it/research/epigenomics-and-transcriptional-regulation).

Education

Title: PhD in Complexity in Post-Genomic Biology
Institute: University of Torino
Location: Torino
Country: Italy
From: 2004 To: 2006

Title: Master in Bioinformatics
Institute: Milano-Bicocca University
Location: Milano
Country: Italy
From: 2002 To: 2003

Title: Master’s degree in Industrial Biotechnologies
Institute: Milano-Bicocca University
Location: Milano
Country: Italy
From: 1995 To: 2001

Experience External

Title: Postdoctoral Research Associate
Institute: Salk Institute for Biological Science
Location: La Jolla, CA
Country: USA
From: 2009 To: 2011

Title: Postdoctoral Research Associate
Institute: Yale University
Location: New Haven , CT
Country: USA
From: 2007 To: 2009

Top Publications
2020
Furlan M., de Pretis S., Pelizzola M.
Dynamics of transcriptional and post-transcriptional regulation
Briefings in Bioinformatics
Review Journal
2020
Furlan M., Galeota E., Del Gaudio N., Dassi E., Caselle M., de Pretis S., Pelizzola M.
Genome-wide dynamics of RNA synthesis, processing and degradation without RNA metabolic labeling
Genome Research
2017
De Pretis S., Kress T.R., Morelli M.J., Sabo A., Locarno C., Verrecchia A., Doni M., Campaner S., Amati B., Pelizzola M.
Integrative analysis of RNA polymerase II and transcriptional dynamics upon MYC activation
Genome Research, vol. 27, (no. 10), pp. 1658-1664
2017
Galeota E., Pelizzola M.
Ontology-based annotations and semantic relations in large-scale (epi)genomics data
Briefings in Bioinformatics, vol. 18, (no. 3), pp. 403-412
Article Journal
2015
De Pretis S., Kress T., Morelli M.J., Melloni G.E.M., Riva L., Amati B., Pelizzola M.
INSPEcT: A computational tool to infer mRNA synthesis, processing and degradation dynamics from RNA- and 4sU-seq time course experiments
Bioinformatics, vol. 31, (no. 17), pp. 2829-2835
Article Journal
All Publications
2020
Furlan M., Tanaka I., Leonardi T., de Pretis S., Pelizzola M.
Direct RNA Sequencing for the Study of Synthesis, Processing, and Degradation of Modified Transcripts
Frontiers in Genetics, vol. 11
2020
Furlan M., de Pretis S., Pelizzola M.
Dynamics of transcriptional and post-transcriptional regulation
Briefings in Bioinformatics
Review Journal
2020
Dassi E., Baranov P.V., Pelizzola M.
Editorial: Computational Epitranscriptomics: Bioinformatic Approaches for the Analysis of RNA Modifications
Frontiers in Genetics, vol. 11
2020
Furlan M., Galeota E., Del Gaudio N., Dassi E., Caselle M., de Pretis S., Pelizzola M.
Genome-wide dynamics of RNA synthesis, processing and degradation without RNA metabolic labeling
Genome Research
2020
de Pretis S., Furlan M., Pelizzola M.
INSPEcT-GUI Reveals the Impact of the Kinetic Rates of RNA Synthesis, Processing, and Degradation, on Premature and Mature RNA Species
Frontiers in Genetics, vol. 11