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Alperen Acemoglu

Post Doc

Research Line

Advanced Robotics

Center

IIT Central Research Labs Genova

Contacts

Via Morego, 30, Genova, 16163, Italy.
alperen.acemoglu@iit.it
Contact Me

About

Post-Doc in the Biomedical Robotics Laboratory  - (2018 - )
Istituto Italiano di Tecnologia (IIT), Genova, Italy
Research area: Medical Robotics, Endoscopic Laser Microsurgery

PhD in Advanced Robotics - (2014 - 2018)
Istituto Italiano di Tecnologia (IIT), Genova, Italy
Research area: Medical Robotics, Endoscopic Laser Microsurgery

M.Sc. in Mechatronics Engineering - (2012 - 2014)
Sabanci University, Istanbul, Turkey
Research area: Bio-inspired Microswimmers, Bacteria Motion in Channels

B.Sc. in Mechanical Engineering - (2007 - 2012)
Istanbul Technical University, Istanbul, Turkey
Senior Design Project: Designing, Producing and Characterising Polymer Based Microfluidic System to Seperate Micro-particle

Selected Publications

Journal Papers

  1. Acemoglu, A., Pucci, D., and Mattos, L. S., "Design and Control of a Magnetic Laser Scanner for Endoscopic Microsurgeries," in IEEE/ASME Transactions on Mechatronics. doi: 10.1109/TMECH.2019.2896248
  2. Acemoglu, A., Deshpande, N., and Mattos, L. S., "Towards a Magnetically Actuated Laser Scanner for Endoscopic Microsurgeries". Journal of Medical Robotics Research, 3(02), 1840004.
  3. Caldag, O. H., Acemoglu, A., and Yesilyurt, S. "Experimental characterization of helical swimming trajectories in circular channels". Microfluidics and Nanofluidics, published online 28 July 2017,  21:136, doi: 10.1007/s10404-017-1973-9.
  4. Acemoglu, A., Fichera, L., Kepiro, I. E., Caldwell, D. G., and Mattos, L. S., "Laser Incision Depth Control in Robot-Assisted Soft Tissue Microsurgery.". Journal of Medical Robotics Research. (2017): 1740006 - doi: 10.1142/S2424905X17400062.
  5. Acemoglu, A., and Yesilyurt, S. "Effects of Poiseuille Flows on Swimming of Magnetic Helical Robots in Circular Channels", Microfluidics and Nanofluidics, 19(5), 2015, 1109-1122. doi: 10.1007/s10404-015-1629-6.
  6. Acemoglu, A., and Yesilyurt, S. "Effects of Geometric Parameters on Swimming of Micro Organisms with Single Helical Flagellum in Circular Channels." Biophysical Journal, 2014; 106(7), 1537-1547- doi:10.1016/j.bpj.2014.01.047.
  7. Acemoglu, A., Temel, F. Z., and Yesilyurt, S., “Characterization and Modeling of Micro Swimmers with Helical Tails and Cylindrical Heads Inside Circular Channels,” Journal of Fluids Engineering, 2014; 136(12):121106-121106-6. FE-13-1543 - doi: 10.1115/1.4027222.

 

Conference Proceedings

  1. Acemoglu, A., and Mattos L. S., "Magnetic Laser Scanner for Endoscopic Microsurgery," In Robotics and Automation (ICRA), 2017 IEEE International Conference on, pp. 4215-4220, IEEE.
  2. Acemoglu, A., Temel, F. Z., and Yesilyurt, S., “Characterization and modeling of micro swimmers with helical tails and cylindrical heads inside circular channels,” ASME 11th Int. Conf. on Nanochannels, Microchannels and Minichannels, ICNMM2013, Sapporo, Japan, 16-19 June 2013.
  3. Acemoglu, A., Gungor Y. U., Balcı Y. S., Trabzon L., and Kızıl H.,"Designing, Producing and Characterising Polymer Based Microfluidic System to Seperate Micro-particle.", II. National Nanotechnology Congress Istanbul, 27-28 June 2012.
  4. Acemoglu, A., Ozkapıcı V., Kara V., Tayafeh O., Kızıl H. and Trabzon L.,"Fabrication of Micro Channels with Angled Sidewall on Silicon bu Nd-YAG Laser Ablation", Proceedings of 6th Nanoscience and Nanotechnology Conference, Izmir, 15 – 18 June 2010

 

Presentations in International Conferences

  1. Acemoglu, A., Deshpande, N., and Mattos, L. S., "A Magnetic Laser Scanner for Non-Contact Endoscopic Ablations", Hamlyn Symposium on Medical Robotics, 25-28 June 2017, London, UK.
  2. Acemoglu, A. and Mattos, L.S., “Magnetically Actuated Surgical Laser Scanner for Endoscopic Applications”, Joint Workshop on New Technologies for Computer/Robot Assisted Surgery 6th edition, 12-14 September 2016, Pisa, Italy.
  3. Acemoglu, A. and Mattos, L.S., “Characterization of Magnetic Field for Scanning Laser Module”, Joint Workshop on New Technologies for Computer/Robot Assisted Surgery 5th edition, 10-12 September 2015, Brussels, Belgium.
  4. Acemoglu, A. and Yesilyurt, S., “Magnetic Helical Microswimmers in Poiseuille Flow,” 67th Annual Meeting of the APS Division of Fluid Dynamics, San Francisco, CA, USA, Nov. 2014."
  5. Acemoglu, A., Temel, F. Z., and Yesilyurt, S., “Characterization of artificial magnetic swimmers in channels,” 66th Annual Meeting of the APS Division of Fluid Dynamics, Pittsburgh, PA, USA, Nov. 2013.
  6. Temel, F. Z., Acemoglu, A., and Yesilyurt, S. “Modeling and navigation of artificial helical swimmers in channels,” 66th Annual Meeting of the APS Division of Fluid Dynamics, Pittsburgh, PA, USA, Nov. 2013.
  7. Temel, F. Z., Acemoglu, A., and Yesilyurt, S., “Modeling and navigation of artificial helical swimmers in channels,” Advances in Microfluidics & Nanofluidics, AMN2013 Conference, University of Notre Dame, IN, USA, 24-26 May 2013.

Awards

Awards & Scholarships

  1. Best Poster Award, Magnetically Actuated Surgical Laser Scanner for Endoscopic Applications, 6th Joint Workshop on New Technologies for Computer/Robot Assisted Surgery, CRAS 2016.
  2. Dr. Gürsel Sönmez Research Award, Sabanci University, Istanbul, Turkey. (2013 - 2014)
  3. Sabanci Unviersity Tuition Waiver. (09/2012 - 07/2014)
  4. TUBITAK 1001 Project Scholarship - Grant number: 111M376 - Project: "Modeling and Characterization of Motion of Helices inside Narrow Channels". (09/2012 - 01/2014)

Colleagues in Advanced Robotics See all

Riccardo Sepe
Monica Vasco
Abdeldjallil Naceri
Darwin Caldwell
Silvia Ivaldi
Floriana Sardi
Jacopo Tessadori
Leonardo De Mattos
Stefano Cordasco
Phil Edward Hudson

Former Colleagues

Emanuele Guglielmino
Alessio Rocchi
Leonel Rozo
Simona Casini
Heijmink Elco
Giovanni Gerardo Muscolo
Lara Soggiu
Timi Okoya

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I numeri di IIT

L’Istituto Italiano di Tecnologia (IIT) è una fondazione di diritto privato - cfr. determinazione Corte dei Conti 23/2015 “IIT è una fondazione da inquadrare fra gli organismi di diritto pubblico con la scelta di un modello di organizzazione di diritto privato per rispondere all’esigenza di assicurare procedure più snelle nella selezione non solo nell’ambito nazionale dei collaboratori, scienziati e ricercatori ”.

IIT è sotto la vigilanza del Ministero dell'Istruzione, dell'Università e della Ricerca e del Ministero dell'Economia e delle Finanze ed è stato istituito con la Legge 326/2003. La Fondazione ha l'obiettivo di promuovere l'eccellenza nella ricerca di base e in quella applicata e di favorire lo sviluppo del sistema economico nazionale. La costruzione dei laboratori iniziata nel 2006 si è conclusa nel 2009.

Lo staff complessivo di IIT conta circa 1440 persone. L’area scientifica è rappresentata da circa l’85% del personale. Il 45% dei ricercatori proviene dall’estero: di questi, il 29% è costituito da stranieri provenienti da oltre 50 Paesi e il 16% da italiani rientrati. Oggi il personale scientifico è composto da circa 60 principal investigators, circa 110 ricercatori e tecnologi di staff, circa 350 post doc, circa 500 studenti di dottorato e borsisti, circa 130 tecnici. Oltre 330 posti su 1400 creati su fondi esterni. Età media 34 anni. 41% donne / 59 % uomini.

Nel 2015 IIT ha ricevuto finanziamenti pubblici per circa 96 milioni di euro (80% del budget), conseguendo fondi esterni per 22 milioni di euro (20% budget) provenienti da 18 progetti europei, 17 finanziamenti da istituzioni nazionali e internazionali, circa 60 progetti industriali

La produzione di IIT ad oggi vanta circa 6990 pubblicazioni, oltre 130 finanziamenti Europei e 11 ERC, più di 350 domande di brevetto attive, oltre 12 start up costituite e altrettante in fase di lancio. Dal 2009 l’attività scientifica è stata ulteriormente rafforzata con la creazione di dieci centri di ricerca nel territorio nazionale (a Torino, Milano, Trento, Parma, Roma, Pisa, Napoli, Lecce, Ferrara) e internazionale (MIT ed Harvard negli USA) che, unitamente al Laboratorio Centrale di Genova, sviluppano i programmi di ricerca del piano scientifico 2015-2017.

Financial Highlights
Facts and Figures

IIT: the numbers

Istituto Italiano di Tecnologia (IIT) is a public research institute that adopts the organizational model of a private law foundation. IIT is overseen by Ministero dell'Istruzione, dell'Università e della Ricerca and Ministero dell'Economia e delle Finanze (the Italian Ministries of Education, Economy and Finance).  The Institute was set up according to Italian law 326/2003 with the objective of promoting excellence in basic and applied research andfostering Italy’s economic development. Construction of the Laboratories started in 2006 and finished in 2009.

IIT has an overall staff of about 1,440 people. The scientific staff covers about 85% of the total. Out of 45% of researchers coming from abroad 29% are foreigners coming from more than 50 countries and 16% are returned Italians. The scientific staff currently consists of approximately 60 Principal Investigators, 110 researchers and technologists, 350 post-docs and 500 PhD students and grant holders and 130 technicians. External funding has allowed the creation of more than 330 positions . The average age is 34 and the gender balance proportion  is 41% female against 59% male.

In 2015 IIT received 96 million euros in public funding (accounting for 80% of its budget) and obtained 22 million euros in external funding (accounting for 20% of its budget). External funding comes from 18 European Projects, other 17 national and international competitive projects and approximately 60 industrial projects.

So far IIT accounts for: about 6990 publications, more than 130 European grants and 11 ERC grants, more than 350 patents or patent applications, 12 up start-ups and as many  which are about to be launched. The Institute’s scientific activity has been further strengthened since 2009 with the establishment of 11 research nodes throughout Italy (Torino, Milano, Trento, Parma, Roma, Pisa, Napoli, Lecce, Ferrara) and abroad (MIT and Harvard University, USA), which, along with the Genoa-based Central Lab, implement the research programs included in the 2015-2017 Strategic Plan.

Financial Highlights
Facts and Figures