IIT Publications Search

2022
Cava C., Armaos A., Lang B., Tartaglia G.G., Castiglioni I.
Identification of long non-coding RNAs and RNA binding proteins in breast cancer subtypes
Scientific Reports, vol. 12, (no. 1)
2022
Delli Ponti R., Tartaglia G.G.
Predicting RNA Secondary Structure Using In Vitro and In Vivo Data
Methods in molecular biology (Clifton, N.J.), vol. 2404, pp. 43-52
DOI 10.1007/978-1-0716-1851-6_2 Book Chapter Book Series
2022
Valentini P., Pierattini B., Zacco E., Mangoni D., Espinoza S., Webster N.A., Andrews B., Carninci P., Tartaglia G.G., Pandolfini L., Gustincich S.
Towards SINEUP-based therapeutics: Design of an in vitro synthesized SINEUP RNA
Molecular Therapy - Nucleic Acids, vol. 27, pp. 1092-1102
2021
Grassmann G., Miotto M., Di Rienzo L., Salaris F., Silvestri B., Zacco E., Rosa A., Tartaglia G.G., Ruocco G., Milanetti E.
A computational approach to investigate tdp-43 rna-recognition motif 2 c-terminal fragments aggregation in amyotrophic lateral sclerosis
Biomolecules, vol. 11, (no. 12)
DOI 10.3390/biom11121905 Article Journal
2021
Gaziano L., Giambartolomei C., Pereira A.C., Gaulton A., Posner D.C., Swanson S.A., Ho Y.-L., Iyengar S.K., Kosik N.M., Vujkovic M., Gagnon D.R., Bento A.P., Barrio-Hernandez I., Ronnblom L., Hagberg N., Lundtoft C., Langenberg C., Pietzner M., Valentine D., Gustincich S., Tartaglia G.G., Allara E., Surendran P., Burgess S., Zhao J.H., Peters J.E., Prins B.P., Angelantonio E.D., Devineni P., Shi Y., Lynch K.E., DuVall S.L., Garcon H., Thomann L.O., Zhou J.J., Gorman B.R., Huffman J.E., O'Donnell C.J., Tsao P.S., Beckham J.C., Pyarajan S., Muralidhar S., Huang G.D., Ramoni R., Beltrao P., Danesh J., Hung A.M., Chang K.-M., Sun Y.V., Joseph J., Leach A.R., Edwards T.L., Cho K., Gaziano J.M., Butterworth A.S., Casas J.P.
Actionable druggable genome-wide Mendelian randomization identifies repurposing opportunities for COVID-19
Nature Medicine, vol. 27, (no. 4), pp. 668-676
2021
Monti M., Armaos A., Fantini M., Pastore A., Tartaglia G.G.
Aggregation is a Context-Dependent Constraint on Protein Evolution
Frontiers in Molecular Biosciences, vol. 8
2021
Armaos A., Colantoni A., Proietti G., Rupert J., Tartaglia G.G.
CatRAPID omics v2.0: Going deeper and wider in the prediction of protein-RNA interactions
Nucleic Acids Research, vol. 49, (no. 1), pp. W72-W79
2021
Di Rienzo L., Monti M., Milanetti E., Miotto M., Boffi A., Tartaglia G.G., Ruocco G.
Computational optimization of angiotensin-converting enzyme 2 for SARS-CoV-2 Spike molecular recognition
Computational and Structural Biotechnology Journal, vol. 19, pp. 3006-3014
2021
Chatterji P., Williams P.A., Whelan K.A., Samper F.C., Andres S.F., Simon L.A., Parham L.R., Mizuno R., Lundsmith E.T., Lee D.S.M., Liang S., Wijeratne H., Marti S., Chau L., Giroux V., Wilkins B.J., Wu G.D., Shah P., Tartaglia G.G., Hamilton K.E.
Corrigendum to: Posttranscriptional regulation of colonic epithelial repair by RNA binding protein IMP 1/ IGF 2 BP 1 (EMBO reports, (2019), 20, 6, 10.15252/embr.201847074)
EMBO Reports, vol. 22, (no. 8)
2021
Battistelli C., Garbo S., Riccioni V., Montaldo C., Santangelo L., Vandelli A., Strippoli R., Tartaglia G.G., Tripodi M., Cicchini C.
Design and functional validation of a mutant variant of the LncRNA HOTAIR to counteract snail function in epithelial-to-mesenchymal transition
Cancer Research, vol. 81, (no. 1), pp. 103-113
2021
Macho Rendon J., Lang B., Ramos Llorens M., Gaetano Tartaglia G., Torrent Burgas M.
DualSeqDB: the host-pathogen dual RNA sequencing database for infection processes
Nucleic Acids Research, vol. 49, (no. D1), pp. D687-D693
2021
Lang B., Yang J.-S., Garriga-Canut M., Speroni S., Aschern M., Gili M., Hoffmann T., Tartaglia G.G., Maurer S.P.
Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins
Nucleic Acids Research, vol. 49, (no. 12), pp. 6702-6721
DOI 10.1093/nar/gkab490 Article Journal
2021
Monti M., Guiducci G., Paone A., Rinaldo S., Giardina G., Liberati F.R., Cutruzzola F., Tartaglia G.G.
Modelling of SHMT1 riboregulation predicts dynamic changes of serine and glycine levels across cellular compartments
Computational and Structural Biotechnology Journal, vol. 19, pp. 3034-3041
2021
Soriano Perez A., Marti F., Tartaglia G.G.
Multiple System Atrophy: A clinical characterization and biomarker discovery study
Multiple System Atrophy: A clinical characterization and biomarker discovery study, Publisher: AU
PhD Thesis Book
2021
Louka A., Bagnoli S., Rupert J., Esapa B., Tartaglia G.G., Cellerino A., Pastore A., Terzibasi Tozzini E.
New lessons on TDP-43 from old N. furzeri killifish
Aging Cell
DOI 10.1111/acel.13517 Article Journal