IIT Publications Search

Publications
2022
Leone M., Galeota E., Masseroli M., Pelizzola M.
Identification, semantic annotation and comparison of combinations of functional elements in multiple biological conditions
Bioinformatics, vol. 38, (no. 5), pp. 1183-1190
2021
Lepesant J.M.J., Iampietro C., Galeota E., Auge B., Aguirrenbengoa M., Merce C., Chaubet C., Rocher V., Haenlin M., Waltzer L., Pelizzola M., Di Stefano L.
A dual role of dLsd1 in oogenesis: Regulating developmental genes and repressing transposons
Nucleic Acids Research, vol. 48, (no. 3), pp. 1206-1224
2021
Furlan M., Delgado-Tejedor A., Mulroney L., Pelizzola M., Novoa E.M., Leonardi T.
Computational methods for RNA modification detection from nanopore direct RNA sequencing data
RNA Biology, vol. 18, (no. S1), pp. 31-40
2021
Furlan M., de Pretis S., Pelizzola M.
Dynamics of transcriptional and post-transcriptional regulation
Briefings in Bioinformatics, vol. 22, (no. 4)
2021
de Pretis S., Furlan M., Pelizzola M.
Identification of Genes Post-Transcriptionally Regulated from RNA-seq: The Case Study of Liver Hepatocellular Carcinoma
Methods in molecular biology (Clifton, N.J.), vol. 2284, pp. 271-287
2021
Ianniello Z., Sorci M., Ceci Ginistrelli L., Iaiza A., Marchioni M., Tito C., Capuano E., Masciarelli S., Ottone T., Attrotto C., Rizzo M., Franceschini L., de Pretis S., Voso M.T., Pelizzola M., Fazi F., Fatica A.
New insight into the catalytic -dependent and -independent roles of METTL3 in sustaining aberrant translation in chronic myeloid leukemia
Cell Death and Disease, vol. 12, (no. 10)
2021
Biasini A., Abdulkarim B., de Pretis S., Tan J.Y., Arora R., Wischnewski H., Dreos R., Pelizzola M., Ciaudo C., Marques A.C.
Translation is required for miRNA-dependent decay of endogenous transcripts
EMBO Journal, vol. 40, (no. 3)
2020
Furlan M., Tanaka I., Leonardi T., de Pretis S., Pelizzola M.
Direct RNA Sequencing for the Study of Synthesis, Processing, and Degradation of Modified Transcripts
Frontiers in Genetics, vol. 11
2020
Dassi E., Baranov P.V., Pelizzola M.
Editorial: Computational Epitranscriptomics: Bioinformatic Approaches for the Analysis of RNA Modifications
Frontiers in Genetics, vol. 11
2020
Furlan M., Galeota E., Gaudio N.D., Dassi E., Caselle M., de Pretis S., Pelizzola M.
Genome-wide dynamics of RNA synthesis, processing, and degradation without RNA metabolic labeling
Genome Research, vol. 30, (no. 10), pp. 1492-1507
2020
de Pretis S., Furlan M., Pelizzola M.
INSPEcT-GUI Reveals the Impact of the Kinetic Rates of RNA Synthesis, Processing, and Degradation, on Premature and Mature RNA Species
Frontiers in Genetics, vol. 11
2020
Galeota E., Kishore K., Pelizzola M.
Ontology-driven integrative analysis of omics data through Onassis
Scientific Reports, vol. 10, (no. 1)
2019
Tesi A., de Pretis S., Furlan M., Filipuzzi M., Morelli M.J., Andronache A., Doni M., Verrecchia A., Pelizzola M., Amati B., Sabo A.
An early Myc-dependent transcriptional program orchestrates cell growth during B-cell activation
EMBO Reports, vol. 20, (no. 9)
2019
Furlan M., Galeota E., de Pretis S., Caselle M., Pelizzola M.
M6A-dependent RNA dynamics in T cell differentiation
Genes, vol. 10, (no. 1)
2019
Lobo J., Costa A.L., Cantante M., Guimaraes R., Lopes P., Antunes L., Braga I., Oliveira J., Pelizzola M., Henrique R., Jeronimo C.
M6A RNA modification and its writer/reader VIRMA/YTHDF3 in testicular germ cell tumors: A role in seminoma phenotype maintenance
Journal of Translational Medicine, vol. 17, (no. 1)