Publications
2024
Grassmann G., Miotto M., Desantis F., Di Rienzo L., Tartaglia G.G., Pastore A., Ruocco G., Monti M., Milanetti E.
Computational Approaches to Predict Protein-Protein Interactions in Crowded Cellular Environments
Chemical Reviews, vol. 124, (no. 7), pp. 3932-3977
2024
Benedetti M.C., D'andrea T., Colantoni A., Silachev D., de Turris V., Boussadia Z., Babenko V.A., Volovikov E.A., Belikova L., Bogomazova A.N., Pepponi R., Whye D., Buttermore E.D., Tartaglia G.G., Lagarkova M.A., Katanaev V.L., Musayev I., Martinelli S., Fucile S., Rosa A.
Cortical neurons obtained from patient-derived iPSCs with GNAO1 p.G203R variant show altered differentiation and functional properties
Heliyon, vol. 10, (no. 5)
2024
Desideri F., Grazzi A., Lisi M., Setti A., Santini T., Colantoni A., Proietti G., Carvelli A., Tartaglia G.G., Ballarino M., Bozzoni I.
CyCoNP lncRNA establishes cis and trans RNA–RNA interactions to supervise neuron physiology
Nucleic Acids Research, vol. 52, (no. 16), pp. 9936-9952
2024
Mangoni D., Mazzetti A., Ansaloni F., Simi A., Tartaglia G.G., Pandolfini L., Gustincich S., Sanges R.
From the genome's perspective: Bearing somatic retrotransposition to leverage the regulatory potential of L1 RNAs
BioEssays
2024
Garbo S., D'Andrea D., Colantoni A., Fiorentino F., Mai A., Ramos A., Tartaglia G.G., Tancredi A., Tripodi M., Battistelli C.
m6A modification inhibits miRNAs’ intracellular function, favoring their extracellular export for intercellular communication
Cell Reports, vol. 43, (no. 6)
2024
Miotto M., Warner N., Ruocco G., Tartaglia G.G., Scherman O.A., Milanetti E.
Osmolyte-induced protein stability changes explained by graph theory
Computational and Structural Biotechnology Journal, vol. 23, pp. 4077-4087
2024
Luige J., Armaos A., Tartaglia G.G., Orom U.A.V.
Predicting nuclear G-quadruplex RNA-binding proteins with roles in transcription and phase separation
Nature Communications, vol. 15, (no. 1)
2024
Fiorentino J., Armaos A., Colantoni A., Tartaglia G.G.
Prediction of protein-RNA interactions from single-cell transcriptomic data
Nucleic Acids Research, vol. 52, (no. 6)
2024
Spence H., Waldron F.M., Saleeb R.S., Brown A.-L., Rifai O.M., Gilodi M., Read F., Roberts K., Milne G., Wilkinson D., O'Shaughnessy J., Pastore A., Fratta P., Shneider N., Tartaglia G.G., Zacco E., Horrocks M.H., Gregory J.M.
RNA aptamer reveals nuclear TDP-43 pathology is an early aggregation event that coincides with STMN-2 cryptic splicing and precedes clinical manifestation in ALS
Acta Neuropathologica, vol. 147, (no. 1)
2024
Zacco E., Broglia L., Kurihara M., Pastore A., Gustincich S., Plath K., Nagakawa S., Cerase A., Sanchez de Groot N., Tartaglia G.G.
RNA: The Unsuspected Conductor in the Orchestra of Macromolecular Crowding
Chemical Reviews
2024
Spizzichino S., Di Fonzo F., Marabelli C., Tramonti A., Chaves-Sanjuan A., Parroni A., Boumis G., Liberati F.R., Paone A., Montemiglio L.C., Ardini M., Jakobi A.J., Bharadwaj A., Swuec P., Tartaglia G.G., Paiardini A., Contestabile R., Mai A., Rotili D., Fiorentino F., Macone A., Giorgi A., Tria G., Rinaldo S., Bolognesi M., Giardina G., Cutruzzola F.
Structure-based mechanism of riboregulation of the metabolic enzyme SHMT1
Molecular Cell
2024
Delli Ponti R., Vandelli A., Tartaglia G.G.
Subgenomic flaviviral RNAs and human proteins: in silico exploration of anti-host defense mechanisms
Computational and Structural Biotechnology Journal, vol. 23, pp. 3527-3536
Article
Journal
2024
Panei F.P., Di Rienzo L., Zacco E., Armaos A., Tartaglia G.G., Ruocco G., Milanetti E.
Synchronized motion of interface residues for evaluating protein–RNA complex binding affinity: Application to aptamer-mediated inhibition of TDP-43 aggregates
Protein Science, vol. 33, (no. 12)
2024
Dudas E.F., Tully M.D., Foldes T., Kelly G., Tartaglia G.G., Pastore A.
The structural properties of full-length annexin A11
Frontiers in Molecular Biosciences, vol. 11
2024
Cipriano A., Colantoni A., Calicchio A., Fiorentino J., Gomes D., Moqri M., Parker A., Rasouli S., Caldwell M., Briganti F., Roncarolo M.G., Baldini A., Weinacht K.G., Tartaglia G.G., Sebastiano V.
Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm
Genome Biology, vol. 25, (no. 1)